WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Differentially regulated transcripts were determined by edgeR. For the microarray and NanoString analyses, genes were considered differentially regulated at FDR < 0.05 and log2 (Fold Change) > 1 or < 1. Description  Transcripts that showed significantly decreased expression in pmk-1(km25) comparing to in N2.
Primary Identifier  WBPaper00050515:pmk-1(km25)_downregulated
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0 Anatomy Terms

44 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000133 amt-1 C05E11.4 Caenorhabditis elegans
WBGene00001761 gst-13 T26C5.1 Caenorhabditis elegans
WBGene00003091 lys-2 Y22F5A.5 Caenorhabditis elegans
WBGene00003528 nas-9 C37H5.9 Caenorhabditis elegans
WBGene00003530 nas-11 K11G12.1 Caenorhabditis elegans
WBGene00003736 nhx-9 ZK822.3 Caenorhabditis elegans
WBGene00003766 nlp-28 B0213.3 Caenorhabditis elegans
WBGene00003767 nlp-29 B0213.4 Caenorhabditis elegans
WBGene00003768 nlp-30 B0213.5 Caenorhabditis elegans
WBGene00003769 nlp-31 B0213.6 Caenorhabditis elegans
WBGene00003771 nlp-33 T19C4.7 Caenorhabditis elegans
WBGene00007807 C29F3.7 C29F3.7 Caenorhabditis elegans
WBGene00007867 C32H11.4 C32H11.4 Caenorhabditis elegans
WBGene00007875 dod-24 C32H11.12 Caenorhabditis elegans
WBGene00008486 ugt-44 F01D4.2 Caenorhabditis elegans
WBGene00008492 F01D5.1 F01D5.1 Caenorhabditis elegans
WBGene00008494 F01D5.3 F01D5.3 Caenorhabditis elegans
WBGene00008584 irg-4 F08G5.6 Caenorhabditis elegans
WBGene00009429 irg-5 F35E12.5 Caenorhabditis elegans
WBGene00010050 F54D5.4 F54D5.4 Caenorhabditis elegans
WBGene00010124 F55G11.4 F55G11.4 Caenorhabditis elegans
WBGene00010128 F55G11.8 F55G11.8 Caenorhabditis elegans
WBGene00010613 K07A1.6 K07A1.6 Caenorhabditis elegans
WBGene00010659 K08D8.5 K08D8.5 Caenorhabditis elegans
WBGene00010745 dod-17 K10D11.1 Caenorhabditis elegans
WBGene00011190 swt-6 R10D12.9 Caenorhabditis elegans
WBGene00011668 clec-47 T09F5.9 Caenorhabditis elegans
WBGene00011979 sysm-1 T24B8.5 Caenorhabditis elegans
WBGene00012535 Y37A1A.2 Y37A1A.2 Caenorhabditis elegans
WBGene00012783 Y43C5A.3 Y43C5A.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004055 pmk-1 B0218.3 Caenorhabditis elegans

0 Regulated By Molecule