WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00092178 Phenotype Remark  In muscle cells with nearly undetectable PAT-6 (after RNAi), CPNA-1 was mislocalized, being found in abnormal accumulations or at the edges of the muscle cell.
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation (T21D12.4).

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003932 pat-6 T21D12.4 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21D12.4 T21D12.4 1128   IV: 262009-262059

1 Laboratories

Primary Identifier
GB

1 Phenotype

Identifier Name Description
WBPhenotype:0000436 protein subcellular localization variant Any variation in the placement of a protein within in a cell or cellular compartment compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041875

1 Strain

WormBase ID
WBStrain00000001