WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T21D12.4 Sequence Name  T21D12.4
Length (nt)  1128   Chromosome Location  IV: 262009-262059
Chromosome . Primary Identifier  IV Chromosome Location . Start  262009
Chromosome Location . End  262059
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21D12.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18268 PAT-6 43.0 375 Caenorhabditis elegans
 

Other

32 RNAi

WormBase ID
WBRNAi00092178
WBRNAi00053732
WBRNAi00109206
WBRNAi00009203
WBRNAi00116141
WBRNAi00063988
WBRNAi00033354
WBRNAi00091715
WBRNAi00109401
WBRNAi00109595
WBRNAi00108573
WBRNAi00086103
WBRNAi00070224
WBRNAi00108648
WBRNAi00081074
WBRNAi00091730
WBRNAi00060082
WBRNAi00060083
WBRNAi00091670
WBRNAi00075646
WBRNAi00060084
WBRNAi00060085
WBRNAi00091745
WBRNAi00109304
WBRNAi00026343
WBRNAi00109498
WBRNAi00091685
WBRNAi00114648
WBRNAi00080818
WBRNAi00091766

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T21D12.4 262009 262059 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003932 pat-6 T21D12.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T21D12.4 262009 262059 -1
CDS:T21D12.4 262396 262614 -1
CDS:T21D12.4 262670 262960 -1
CDS:T21D12.4 263508 263642 -1
CDS:T21D12.4 263703 263890 -1
CDS:T21D12.4 263936 264011 -1
CDS:T21D12.4 264057 264224 -1

1 Sequence

Length
1128

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T21D12.4.1 T21D12.4.1 1259   IV: 261886-264232