WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00088849 Genotype  rtEx721[flp-18p::lin-12(RNAi) myo-2p::gfp]; glp-1(bn18)III
Phenotype Remark  [flp-18p::lin-12(RNAi)];glr-1(bn18) animals take more time to respond to octanol compared to wild type (N2) animals on control RNAi. Remark  lin-12 dsRNA expressed under the control of the flp-18 promoter in the AIY, AVA, RIG, RIM, M2, and M3 neurons; Authors report using a 3.8kb fragment of lin-12 cDNA containing the EGF repeats and LNR domain; first 3.8kb of the lin-12 open reading frame used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003001 lin-12 R107.8 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R107.8 R107.8 4290   III: 9060402-9060524

1 Laboratories

Primary Identifier
HA

1 Phenotype

Identifier Name Description
WBPhenotype:0000412 octanol chemotaxis defective Failure to execute the characteristic response to 1-octanol as defined by control animals. In C.elegans 1-octanol is typically a repellant.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00038400

0 Strain