WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R107.8 Sequence Name  R107.8
Length (nt)  4290   Chromosome Location  III: 9060402-9060524
Chromosome . Primary Identifier  III Chromosome Location . Start  9060402
Chromosome Location . End  9060524
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R107.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE00274 LIN-12 157.1 1429 Caenorhabditis elegans
 

Other

26 RNAi

WormBase ID
WBRNAi00088848
WBRNAi00088847
WBRNAi00088849
WBRNAi00088845
WBRNAi00110325
WBRNAi00068252
WBRNAi00067863
WBRNAi00051673
WBRNAi00009057
WBRNAi00026074
WBRNAi00061287
WBRNAi00061288
WBRNAi00064619
WBRNAi00064835
WBRNAi00071702
WBRNAi00092186
WBRNAi00005039
WBRNAi00092187
WBRNAi00071343
WBRNAi00063584
WBRNAi00063589
WBRNAi00063599
WBRNAi00110323
WBRNAi00086444
WBRNAi00086446
WBRNAi00086447

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R107.8 9060402 9060524 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003001 lin-12 R107.8 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:R107.8 9060402 9060524 -1
CDS:R107.8 9060912 9061259 -1
CDS:R107.8 9061570 9063493 -1
CDS:R107.8 9063542 9063670 -1
CDS:R107.8 9063717 9063849 -1
CDS:R107.8 9064154 9065270 -1
CDS:R107.8 9066723 9066913 -1
CDS:R107.8 9067929 9067985 -1
CDS:R107.8 9069601 9069719 -1
CDS:R107.8 9071240 9071388 -1

1 Sequence

Length
4290

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R107.8.1 R107.8.1 4555   III: 9060221-9071472