WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077552 Genotype  eri-1(mg366); ifb-2::cfp
Phenotype Remark  reduction in yolk granules

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002056 ifc-2 M6.1 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M6.1e M6.1e 4020   X: 642214-642243
CDS:M6.1a M6.1a 3426   X: 643682-644053
CDS:M6.1b M6.1b 3786   X: 642214-642243
CDS:M6.1d M6.1d 1869   X: 642214-642243
CDS:M6.1f M6.1f 1509   X: 643682-644053

1 Laboratories

Primary Identifier
BJ

2 Phenotype

Identifier Name Description
WBPhenotype:0000416 yolk synthesis variant Variations in the generation of the nutrient protein produced by intestinal cells and secreted by them into the pseudocoelom, from which it can be shared with other tissues in the body compared to control (Wormatlas).
WBPhenotype:0000710 intestinal morphology variant Animals exhibit variations in the form, structure or composition of the chain of cuboidal cells which form a central lumen lined by microvilli that allow the passage of food, compared to control. Food passes from the posterior pharynx to the intestine where it is digested and then on to the rectum which processes the waste products for excretion (Wormatlas).

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000038 exploded through vulva The animal is ruptured at the vulva and displays an extrusion of internal organs at the site of rupture.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031849

0 Strain