WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M6.1a Sequence Name  M6.1a
Length (nt)  3426   Chromosome Location  X: 643682-644053
Chromosome . Primary Identifier  X Chromosome Location . Start  643682
Chromosome Location . End  644053
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M6.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53626 IFC-2, isoform a 129.1 1141 Caenorhabditis elegans
 

Other

21 RNAi

WormBase ID
WBRNAi00077552
WBRNAi00007221
WBRNAi00077554
WBRNAi00115210
WBRNAi00002364
WBRNAi00051032
WBRNAi00009020
WBRNAi00026002
WBRNAi00066805
WBRNAi00115211
WBRNAi00030249
WBRNAi00098348
WBRNAi00062651
WBRNAi00062652
WBRNAi00113739
WBRNAi00113735
WBRNAi00065746
WBRNAi00077560
WBRNAi00112379
WBRNAi00077558
WBRNAi00090677

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M6.1a 643682 644053 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002056 ifc-2 M6.1 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:M6.1a 643682 644053 -1
CDS:M6.1a 644102 644260 -1
CDS:M6.1a 644309 644476 -1
CDS:M6.1a 644528 645022 -1
CDS:M6.1a 645109 645219 -1
CDS:M6.1a 645469 645632 -1
CDS:M6.1a 646206 646308 -1
CDS:M6.1a 646358 647017 -1
CDS:M6.1a 647287 647378 -1
CDS:M6.1a 647475 647727 -1
CDS:M6.1a 647773 647891 -1
CDS:M6.1a 648351 648550 -1
CDS:M6.1a 648789 649005 -1
CDS:M6.1a 649055 649165 -1
CDS:M6.1a 649372 649507 -1
CDS:M6.1a 650027 650092 -1

1 Sequence

Length
3426

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M6.1a.2 M6.1a.2 4016   X: 643108-650108
Transcript:M6.1a.1 M6.1a.1 4317   X: 643108-654904