WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00009372 Phenotype Remark  %lethal range
Secondary Identifier  JA:Y51H7C_255.f

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021784 cogc-4 Y51H7C.6 Caenorhabditis elegans
WBGene00302984 Y51H7C.41 Y51H7C.41 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51H7C.41 Y51H7C.41 234   II: 1403325-1403392
CDS:Y51H7C.6c Y51H7C.6c 957   II: 1403611-1404040
CDS:Y51H7C.6a Y51H7C.6a 2406   II: 1403611-1404040
CDS:Y51H7C.6b Y51H7C.6b 1485   II: 1403611-1404040

1 Laboratories

Primary Identifier
JA

5 Phenotype

Identifier Name Description
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000031 slow growth Any variation that causes a reduction in growth rate compared to control.
WBPhenotype:0000640 egg laying variant Animals exhibit variations in the stage of eggs laid, egg laying cycle, number of eggs or egg laying in response to stimuli compared to control.
WBPhenotype:0001010 clear Animals appear unusually transparent when compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00005654

0 Strain