WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00025863 Genotype  NL4256 rrf-3(pk1426)
Phenotype Remark  %lethal range Secondary Identifier  Simmer:K04F10.4:Screen_A

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000254 bli-4 K04F10.4 Caenorhabditis elegans

10 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04F10.4c K04F10.4c 2484   I: 6342437-6342517
CDS:K04F10.4g K04F10.4g 2208   I: 6342437-6342517
CDS:K04F10.4h K04F10.4h 2241   I: 6342437-6342517
CDS:K04F10.4e K04F10.4e 2175   I: 6342437-6342517
CDS:K04F10.4a K04F10.4a 2013   I: 6342437-6342517
CDS:K04F10.4b K04F10.4b 2193   I: 6342437-6342517
CDS:K04F10.4d K04F10.4d 2829   I: 6342437-6342517
CDS:K04F10.4f K04F10.4f 2001   I: 6342437-6342517
CDS:K04F10.4i K04F10.4i 2151   I: 6342437-6342517
CDS:K04F10.4j K04F10.4j 2019   I: 6342437-6342517

1 Laboratories

Primary Identifier
NL

6 Phenotype

Identifier Name Description
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000583 dumpy Worms are shorter and stouter than control animals at the same developmental stage.
WBPhenotype:0000054 larval lethal The animal dies at any time between hatching and onset to adulthood.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.
WBPhenotype:0000638 molt defect Animals exhibit defects in the process of periodic shedding, of part or all of its cuticle, during cuticle replacement that punctuates each larval stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00006395

0 Strain