WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00066080 Phenotype Remark  PVPR/PVQL guidance defects

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006423 asd-2 T21G5.5 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21G5.5a T21G5.5a 987   I: 6879770-6880041
CDS:T21G5.5b T21G5.5b 1212   I: 6878976-6879204
CDS:T21G5.5c T21G5.5c 1338   I: 6878976-6879204
CDS:T21G5.5d T21G5.5d 1461   I: 6877740-6877801

1 Laboratories

Primary Identifier
VH

7 Phenotype

Identifier Name Description
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0000640 egg laying variant Animals exhibit variations in the stage of eggs laid, egg laying cycle, number of eggs or egg laying in response to stimuli compared to control.
WBPhenotype:0000384 axon guidance variant Variations in the cue-directed extension of an axon towards a specific target site compared to control. (Axon guidance often depends on a combination of attractive and repulsive cues).
WBPhenotype:0000541 cord commissures fail to reach target Axon tracts fail to complete the connection between nerve cords. In C. elegans, these tracts grow circumferentially around the animal, completing the connection between the ventral and dorsal nerve cords.
WBPhenotype:0000632 axon fasciculation variant The ability of axons to converge and form a bundle of nerve fibres (fascicle) is compromised.
WBPhenotype:0001761 axon midline crossing variant Regulated ventral midline crossing by axons vary either in the frequency of crossing events or the maintenance through development of process positions compared to control.
WBPhenotype:0000976 ventral cord patterning variant Any variation in the developmental process that results in the creation of defined areas or spaces within the ventral cord to which cells respond and eventually are instructed to differentiate compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028984

1 Strain

WormBase ID
WBStrain00040018