WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00001405 Remark  yk309c7
Secondary Identifier  SA:yk309c7

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

6 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012828 Y43F8C.6 Y43F8C.6 Caenorhabditis elegans
WBGene00012829 Y43F8C.7 Y43F8C.7 Caenorhabditis elegans
WBGene00012830 mrps-28 Y43F8C.8 Caenorhabditis elegans
WBGene00012827 Y43F8C.5 Y43F8C.5 Caenorhabditis elegans
WBGene00045120 Y43F8C.22 Y43F8C.22 Caenorhabditis elegans
WBGene00012831 Y43F8C.9 Y43F8C.9 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y43F8C.6a Y43F8C.6a 1269   V: 19633209-19633285
CDS:Y43F8C.6b Y43F8C.6b 1284   V: 19635080-19635397
CDS:Y43F8C.7 Y43F8C.7 711   V: 19641485-19641571
CDS:Y43F8C.8 Y43F8C.8 519   V: 19644239-19644370
CDS:Y43F8C.9 Y43F8C.9 327   V: 19646117-19646236
CDS:Y43F8C.5 Y43F8C.5 738   V: 19631424-19631673

2 Laboratories

Primary Identifier
SA
YK

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain