WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y43F8C.8 Sequence Name  Y43F8C.8
Length (nt)  519   Chromosome Location  V: 19644239-19644370
Chromosome . Primary Identifier  V Chromosome Location . Start  19644239
Chromosome Location . End  19644370
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y43F8C.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21906 MRPS-28 19.1 172 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00009331
WBRNAi00001405
WBRNAi00007452
WBRNAi00056534
WBRNAi00069448
WBRNAi00022582
WBRNAi00033391
WBRNAi00108670
WBRNAi00108595
WBRNAi00026705
WBRNAi00108730
WBRNAi00108708
WBRNAi00108719

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y43F8C.8 19644239 19644370 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012830 mrps-28 Y43F8C.8 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y43F8C.8 19644239 19644370 1
CDS:Y43F8C.8 19644421 19644587 1
CDS:Y43F8C.8 19645334 19645553 1

1 Sequence

Length
519

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y43F8C.8.1 Y43F8C.8.1 642   V: 19644239-19645676