WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00007333 Remark  yk270d9
Secondary Identifier  SA:yk270d9

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004830 slo-1 Y51A2D.19 Caenorhabditis elegans

13 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y51A2D.19a Y51A2D.19a 3423   V: 18492306-18492460
CDS:Y51A2D.19b Y51A2D.19b 3357   V: 18492306-18492460
CDS:Y51A2D.19c Y51A2D.19c 3396   V: 18492306-18492460
CDS:Y51A2D.19e Y51A2D.19e 3462   V: 18492306-18492460
CDS:Y51A2D.19m Y51A2D.19m 3441   V: 18492306-18492460
CDS:Y51A2D.19d Y51A2D.19d 3483   V: 18492306-18492460
CDS:Y51A2D.19f Y51A2D.19f 3423   V: 18492306-18492460
CDS:Y51A2D.19g Y51A2D.19g 3417   V: 18492306-18492460
CDS:Y51A2D.19h Y51A2D.19h 3357   V: 18492306-18492460
CDS:Y51A2D.19i Y51A2D.19i 3483   V: 18492306-18492460
CDS:Y51A2D.19j Y51A2D.19j 3462   V: 18492306-18492460
CDS:Y51A2D.19k Y51A2D.19k 3417   V: 18492306-18492460
CDS:Y51A2D.19l Y51A2D.19l 3396   V: 18492306-18492460

2 Laboratories

Primary Identifier
SA
YK

0 Phenotype

5 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004651

0 Strain