WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y51A2D.19c Sequence Name  Y51A2D.19c
Length (nt)  3396   Chromosome Location  V: 18492306-18492460
Chromosome . Primary Identifier  V Chromosome Location . Start  18492306
Chromosome Location . End  18492460
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y51A2D.19c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30366 SLO-1, isoform c 128.6 1131 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00007333
WBRNAi00057136
WBRNAi00037348
WBRNAi00113603

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y51A2D.19c 18492306 18492460 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004830 slo-1 Y51A2D.19 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y51A2D.19c 18492306 18492460 1
CDS:Y51A2D.19c 18493131 18493341 1
CDS:Y51A2D.19c 18495017 18495135 1
CDS:Y51A2D.19c 18495292 18495394 1
CDS:Y51A2D.19c 18495556 18495667 1
CDS:Y51A2D.19c 18495990 18496312 1
CDS:Y51A2D.19c 18497242 18497550 1
CDS:Y51A2D.19c 18498535 18498843 1
CDS:Y51A2D.19c 18499582 18499694 1
CDS:Y51A2D.19c 18501000 18501235 1
CDS:Y51A2D.19c 18501935 18501979 1
CDS:Y51A2D.19c 18502068 18502106 1
CDS:Y51A2D.19c 18502793 18502895 1
CDS:Y51A2D.19c 18504147 18504231 1
CDS:Y51A2D.19c 18504832 18505131 1
CDS:Y51A2D.19c 18505872 18506154 1
CDS:Y51A2D.19c 18506376 18506506 1
CDS:Y51A2D.19c 18506886 18507080 1
CDS:Y51A2D.19c 18507569 18507730 1
CDS:Y51A2D.19c 18507872 18507934 1

1 Sequence

Length
3396

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y51A2D.19c.1 Y51A2D.19c.1 3719   V: 18492261-18508212