WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00043539 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044689 arid-1 Y108G3AL.7 Caenorhabditis elegans

9 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y108G3AL.7a Y108G3AL.7a 4938   V: 186305-186307
CDS:Y108G3AL.7c Y108G3AL.7c 4806   V: 187289-187418
CDS:Y108G3AL.7d Y108G3AL.7d 4797   V: 187289-187418
CDS:Y108G3AL.7e Y108G3AL.7e 2958   V: 192904-193745
CDS:Y108G3AL.7f Y108G3AL.7f 2949   V: 192904-193745
CDS:Y108G3AL.7g Y108G3AL.7g 1233   V: 196938-197343
CDS:Y108G3AL.7b Y108G3AL.7b 4947   V: 186305-186307
CDS:Y108G3AL.7h Y108G3AL.7h 1224   V: 196938-197343
CDS:Y108G3AL.7i Y108G3AL.7i 345   V: 199399-199657

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain