WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y108G3AL.7c Sequence Name  Y108G3AL.7c
Length (nt)  4806   Chromosome Location  V: 187289-187418
Chromosome . Primary Identifier  V Chromosome Location . Start  187289
Chromosome Location . End  187418
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y108G3AL.7c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50724 ARID-1, isoform c 180.4 1601 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00043539
WBRNAi00055290
WBRNAi00012614
WBRNAi00030437
WBRNAi00062183

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y108G3AL.7c 187289 187418 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044689 arid-1 Y108G3AL.7 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y108G3AL.7c 187289 187418 1
CDS:Y108G3AL.7c 188070 188235 1
CDS:Y108G3AL.7c 189302 190307 1
CDS:Y108G3AL.7c 191282 191609 1
CDS:Y108G3AL.7c 192686 193745 1
CDS:Y108G3AL.7c 194545 195392 1
CDS:Y108G3AL.7c 196903 197343 1
CDS:Y108G3AL.7c 198917 199657 1
CDS:Y108G3AL.7c 200346 200431 1

1 Sequence

Length
4806

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y108G3AL.7c.1 Y108G3AL.7c.1 4806   V: 187289-200431