WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00043567 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008443 pde-3 E01F3.1 Caenorhabditis elegans

10 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E01F3.1e E01F3.1e 2037   II: 14919769-14919921
CDS:E01F3.1i E01F3.1i 2082   II: 14919769-14919921
CDS:E01F3.1b E01F3.1b 1878   II: 14924423-14924507
CDS:E01F3.1g E01F3.1g 1782   II: 14931238-14931333
CDS:E01F3.1f E01F3.1f 1737   II: 14931238-14931333
CDS:E01F3.1d E01F3.1d 1524   II: 14949547-14949692
CDS:E01F3.1a E01F3.1a 1419   II: 14949750-14950037
CDS:E01F3.1c E01F3.1c 1770   II: 14944365-14944655
CDS:E01F3.1h E01F3.1h 1725   II: 14944365-14944655
CDS:E01F3.1j E01F3.1j 1923   II: 14924423-14924507

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain