WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:E01F3.1f Sequence Name  E01F3.1f
Length (nt)  1737   Chromosome Location  II: 14931238-14931333
Chromosome . Primary Identifier  II Chromosome Location . Start  14931238
Chromosome Location . End  14931333
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01F3.1f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37890 PDE-3, isoform f 65.1 578 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00043567

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:E01F3.1f 14931238 14931333 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008443 pde-3 E01F3.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier 		Start End Strand
CDS:E01F3.1f 14931238 14931333 1
CDS:E01F3.1f 14932999 14933205 1
CDS:E01F3.1f 14945217 14945317 1
CDS:E01F3.1f 14949791 14950037 1
CDS:E01F3.1f 14950100 14950211 1
CDS:E01F3.1f 14950388 14950644 1
CDS:E01F3.1f 14951002 14951120 1
CDS:E01F3.1f 14951188 14951545 1
CDS:E01F3.1f 14951626 14951761 1
CDS:E01F3.1f 14952351 14952451 1
CDS:E01F3.1f 14952610 14952612 1

1 Sequence

Length
1737

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:E01F3.1f.1 E01F3.1f.1 1737   II: 14931238-14952612