WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00051319 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

5 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003430 msp-32 R05F9.3 Caenorhabditis elegans
WBGene00003431 msp-33 R05F9.8 Caenorhabditis elegans
WBGene00003470 msp-152 ZK546.6 Caenorhabditis elegans
WBGene00003435 msp-40 C33F10.9 Caenorhabditis elegans
WBGene00003429 msp-31 R05F9.13 Caenorhabditis elegans

5 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R05F9.8 R05F9.8 384   II: 4892311-4892694
CDS:R05F9.3 R05F9.3 360   II: 4898829-4899188
CDS:ZK546.6 ZK546.6 384   II: 4933027-4933410
CDS:C33F10.9 C33F10.9 384   II: 4825414-4825797
CDS:R05F9.13 R05F9.13 384   II: 4916179-4916562

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain