WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00055236 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002978 lev-11 Y105E8B.1 Caenorhabditis elegans

18 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8B.1k Y105E8B.1k 771   I: 14621514-14621596
CDS:Y105E8B.1l Y105E8B.1l 771   I: 14621514-14621596
CDS:Y105E8B.1o Y105E8B.1o 855   I: 14621514-14621596
CDS:Y105E8B.1n Y105E8B.1n 468   I: 14621514-14621596
CDS:Y105E8B.1p Y105E8B.1p 855   I: 14621514-14621596
CDS:Y105E8B.1q Y105E8B.1q 855   I: 14621514-14621596
CDS:Y105E8B.1d Y105E8B.1d 855   I: 14622429-14622511
CDS:Y105E8B.1j Y105E8B.1j 468   I: 14622429-14622511
CDS:Y105E8B.1i Y105E8B.1i 582   I: 14622429-14622511
CDS:Y105E8B.1g Y105E8B.1g 855   I: 14622429-14622511
CDS:Y105E8B.1e Y105E8B.1e 771   I: 14622661-14622743
CDS:Y105E8B.1a Y105E8B.1a 855   I: 14621514-14621596
CDS:Y105E8B.1b Y105E8B.1b 582   I: 14622429-14622511
CDS:Y105E8B.1c Y105E8B.1c 771   I: 14622429-14622511
CDS:Y105E8B.1m Y105E8B.1m 582   I: 14621514-14621596
CDS:Y105E8B.1r Y105E8B.1r 855   I: 14621514-14621596
CDS:Y105E8B.1s Y105E8B.1s 855   I: 14621514-14621596
CDS:Y105E8B.1t Y105E8B.1t 771   I: 14622429-14622511

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain