WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y105E8B.1e Sequence Name  Y105E8B.1e
Length (nt)  771   Chromosome Location  I: 14622661-14622743
Chromosome . Primary Identifier  I Chromosome Location . Start  14622661
Chromosome Location . End  14622743
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8B.1e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE31733 LEV-11, isoform e 29.6 256 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00061187
WBRNAi00061188
WBRNAi00061189
WBRNAi00061192
WBRNAi00028216
WBRNAi00055236
WBRNAi00073321
WBRNAi00073323
WBRNAi00073322
WBRNAi00064047
WBRNAi00061195
WBRNAi00061196

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y105E8B.1e 14622661 14622743 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002978 lev-11 Y105E8B.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y105E8B.1e 14622661 14622743 -1
CDS:Y105E8B.1e 14622828 14622897 -1
CDS:Y105E8B.1e 14623010 14623148 -1
CDS:Y105E8B.1e 14623828 14623898 -1
CDS:Y105E8B.1e 14624544 14624661 -1
CDS:Y105E8B.1e 14624956 14625089 -1
CDS:Y105E8B.1e 14625279 14625434 -1

1 Sequence

Length
771

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y105E8B.1e.1 Y105E8B.1e.1 1200   I: 14621172-14625435
Transcript:Y105E8B.1e.2 Y105E8B.1e.2 852   I: 14622581-14625435