WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00055990 Remark 
Secondary Identifier 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000674 col-99 F29C4.8 Caenorhabditis elegans

17 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29C4.8k F29C4.8k 2172   IV: 138699-138855
CDS:F29C4.8l F29C4.8l 2136   IV: 138699-138855
CDS:F29C4.8m F29C4.8m 2100   IV: 138699-138855
CDS:F29C4.8o F29C4.8o 2127   IV: 138699-138855
CDS:F29C4.8p F29C4.8p 2091   IV: 138699-138855
CDS:F29C4.8q F29C4.8q 2055   IV: 138699-138855
CDS:F29C4.8a F29C4.8a 2124   IV: 138760-138855
CDS:F29C4.8f F29C4.8f 2007   IV: 138760-138855
CDS:F29C4.8c F29C4.8c 2088   IV: 138760-138855
CDS:F29C4.8g F29C4.8g 2016   IV: 138760-138855
CDS:F29C4.8h F29C4.8h 2043   IV: 138760-138855
CDS:F29C4.8b F29C4.8b 2151   IV: 138760-138855
CDS:F29C4.8d F29C4.8d 2052   IV: 138760-138855
CDS:F29C4.8e F29C4.8e 2079   IV: 138760-138855
CDS:F29C4.8i F29C4.8i 1971   IV: 138760-138855
CDS:F29C4.8j F29C4.8j 2208   IV: 138699-138855
CDS:F29C4.8n F29C4.8n 2163   IV: 138699-138855

1 Laboratories

Primary Identifier
TH

0 Phenotype

4 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000535 organism morphology variant Animals exhibit variations in the form, structure or composition of any part of their anatomy compared to control animals.
WBPhenotype:0000689 maternal sterile Animals produce no or very few embryos as a result of experimental treatment. This is in contrast to sterility due to genetic perturbations (maternal effect sterility).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00025054

0 Strain