WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F29C4.8m Sequence Name  F29C4.8m
Length (nt)  2100   Chromosome Location  IV: 138699-138855
Chromosome . Primary Identifier  IV Chromosome Location . Start  138699
Chromosome Location . End  138855
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29C4.8m

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51359 COL-99, isoform m 70.5 699 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00045920
WBRNAi00055990
WBRNAi00014107
WBRNAi00031574

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F29C4.8m 138699 138855 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000674 col-99 F29C4.8 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:F29C4.8m 138699 138855 -1
CDS:F29C4.8m 139236 139258 -1
CDS:F29C4.8m 139335 139496 -1
CDS:F29C4.8m 139551 139595 -1
CDS:F29C4.8m 139730 139912 -1
CDS:F29C4.8m 139954 140070 -1
CDS:F29C4.8m 140142 140300 -1
CDS:F29C4.8m 140543 140698 -1
CDS:F29C4.8m 140805 140981 -1
CDS:F29C4.8m 141068 141418 -1
CDS:F29C4.8m 142260 142295 -1
CDS:F29C4.8m 142441 142548 -1
CDS:F29C4.8m 142602 142658 -1
CDS:F29C4.8m 143757 143791 -1
CDS:F29C4.8m 144796 144886 -1
CDS:F29C4.8m 147677 147919 -1

1 Sequence

Length
2100

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F29C4.8m.1 F29C4.8m.1 2100   IV: 138699-147919