WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00086201 Phenotype Remark  Addition of 100 micromolar poly-unsaturated fatty acids (PUFAs) Eicosapentaenoic Acid and Di-homo-gamma-linolenic Acid to growth medium partially suppressed the phenotypes associated with mdt-15 RNAi: intestinal vacuoles, uncoordination, shortened lifespan, altered intestinal and germline morphology, and dead offspring

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007016 mdt-15 R12B2.5 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R12B2.5b R12B2.5b 2334   III: 5830222-5830320
CDS:R12B2.5a R12B2.5a 2343   III: 5830222-5830320

1 Laboratories

Primary Identifier
KRY

6 Phenotype

Identifier Name Description
WBPhenotype:0000351 failure to hatch Animals fail to emerge from an egg shell.
WBPhenotype:0000081 L1 arrest The developmental program of the animals does not continue past the first larval stage (L1).
WBPhenotype:0000643 locomotion variant Animals exhibit deviations in self-propelled movement on a solid medium compared to control animals.
WBPhenotype:0001428 intestinal vacuole Vacuoles accumulate in the intestine.
WBPhenotype:0001171 shortened life span The duration of viability in the adult phase of the life-cycle is less than that of control animals.
WBPhenotype:0000710 intestinal morphology variant Animals exhibit variations in the form, structure or composition of the chain of cuboidal cells which form a central lumen lined by microvilli that allow the passage of food, compared to control. Food passes from the posterior pharynx to the intestine where it is digested and then on to the rectum which processes the waste products for excretion (Wormatlas).

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00027365

0 Strain