WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00111060 Genotype  zdIs5; sid-1(pk3321);uIs71(Pmec-18::SID-1, Pmyo-2::mCherry)
Remark  The genetic background used in this experiment is to sensitize the touch neurons to feeding RNAi and to avoid lethality associated with systemic knockdown of certain RhoGEFs.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015418 pac-1 C04D8.1 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04D8.1b C04D8.1b 4815   III: 8495110-8495262
CDS:C04D8.1a C04D8.1a 4818   III: 8495110-8495262
CDS:C04D8.1d C04D8.1d 3417   III: 8507635-8507734
CDS:C04D8.1e C04D8.1e 2301   III: 8514103-8514110
CDS:C04D8.1f C04D8.1f 4692   III: 8495110-8495262
CDS:C04D8.1g C04D8.1g 3732   III: 8500271-8500358

0 Laboratories

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000633 axon branching variant Animals display variations in the number or pattern of axonal tracts stemming from the neuron cell body, compared to that observed in control animals.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00045955

0 Strain