WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00074815 Genotype  hpl-2(ok917)
Phenotype Remark  Phenotype was observed in F1 generation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012125 T28D6.5 T28D6.5 Caenorhabditis elegans
WBGene00012126 T28D6.6 T28D6.6 Caenorhabditis elegans

9 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28D6.6a T28D6.6a 1101   III: 11326765-11326771
CDS:T28D6.5f T28D6.5f 2475   III: 11334827-11334954
CDS:T28D6.5g T28D6.5g 2373   III: 11334827-11334954
CDS:T28D6.5d T28D6.5d 2214   III: 11334827-11334954
CDS:T28D6.5c T28D6.5c 2307   III: 11334893-11334954
CDS:T28D6.5a T28D6.5a 2157   III: 11334893-11334954
CDS:T28D6.5b T28D6.5b 2409   III: 11334893-11334954
CDS:T28D6.5e T28D6.5e 2112   III: 11334827-11334954
CDS:T28D6.6b T28D6.6b 669   III: 11326765-11326771

1 Laboratories

Primary Identifier
SV

4 Phenotype

Identifier Name Description
WBPhenotype:0000154 reduced brood size The characteristic number of offspring produced is lower compared to that of control animals.
WBPhenotype:0000697 protruding vulva Animals undergo incomplete vulval morphogenesis, resulting in the formation of a single protrusion at the site of the vulva.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000059 larval arrest The developmental program of the animals halts at any larval stage and thus fails to reach adulthood. In C.elegans, this occurs anytime during L1-L4 stage.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00029258

0 Strain