WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T28D6.5b Sequence Name  T28D6.5b
Length (nt)  2409   Chromosome Location  III: 11334893-11334954
Chromosome . Primary Identifier  III Chromosome Location . Start  11334893
Chromosome Location . End  11334954
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28D6.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43516 T28D6.5, isoform b 90.3 802 Caenorhabditis elegans
 

Other

19 RNAi

WormBase ID
WBRNAi00054405
WBRNAi00054406
WBRNAi00054408
WBRNAi00054409
WBRNAi00074815
WBRNAi00074817
WBRNAi00074816
WBRNAi00074819
WBRNAi00074818
WBRNAi00074821
WBRNAi00074820
WBRNAi00074822
WBRNAi00072670
WBRNAi00020695
WBRNAi00072671
WBRNAi00072672
WBRNAi00006350
WBRNAi00007136
WBRNAi00036082

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T28D6.5b 11334893 11334954 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012125 T28D6.5 T28D6.5 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:T28D6.5b 11334893 11334954 1
CDS:T28D6.5b 11335438 11335666 1
CDS:T28D6.5b 11337438 11337518 1
CDS:T28D6.5b 11337937 11338038 1
CDS:T28D6.5b 11338314 11338415 1
CDS:T28D6.5b 11338962 11339087 1
CDS:T28D6.5b 11339134 11339571 1
CDS:T28D6.5b 11339706 11339888 1
CDS:T28D6.5b 11339945 11340390 1
CDS:T28D6.5b 11340470 11340822 1
CDS:T28D6.5b 11340940 11341097 1
CDS:T28D6.5b 11341775 11341903 1

1 Sequence

Length
2409

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T28D6.5b.1 T28D6.5b.1 2743   III: 11334893-11342237