WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110611 Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors do state that double-stranded RNA was synthesized from the clone yk391b9.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002261 ldb-1 F58A3.1 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58A3.1c F58A3.1c 1890   X: 11028917-11029040
CDS:F58A3.1b F58A3.1b 1737   X: 11029715-11029803
CDS:F58A3.1a F58A3.1a 1779   X: 11037203-11037333

0 Laboratories

0 Phenotype

2 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000691 gonad development variant Variations in the progression of the organ that produces gametes over time, from its formation to the mature structure compared to control.
WBPhenotype:0000699 vulva development variant Variations in the progression of the egg-laying organ of female and hermaphrodite nematodes over time, from its formation to the mature structure compared to control. In nematodes, the vulva is formed from ventral epidermal cells during larval stages to give rise to a fully formed vulva in the adult.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00004360

1 Strain

WormBase ID
WBStrain00000001