WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F58A3.1c Sequence Name  F58A3.1c
Length (nt)  1890   Chromosome Location  X: 11028917-11029040
Chromosome . Primary Identifier  X Chromosome Location . Start  11028917
Chromosome Location . End  11029040
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58A3.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23789 LDB-1, isoform c 70.7 629 Caenorhabditis elegans
 

Other

28 RNAi

WormBase ID
WBRNAi00048919
WBRNAi00008890
WBRNAi00110615
WBRNAi00110605
WBRNAi00073151
WBRNAi00025740
WBRNAi00110611
WBRNAi00068431
WBRNAi00068433
WBRNAi00068432
WBRNAi00068435
WBRNAi00068434
WBRNAi00073153
WBRNAi00064833
WBRNAi00068897
WBRNAi00110606
WBRNAi00110609
WBRNAi00033056
WBRNAi00110610
WBRNAi00071631
WBRNAi00064581
WBRNAi00073152
WBRNAi00110608
WBRNAi00110607
WBRNAi00110604
WBRNAi00110613
WBRNAi00110614
WBRNAi00110612

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F58A3.1c 11028917 11029040 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002261 ldb-1 F58A3.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F58A3.1c 11028917 11029040 1
CDS:F58A3.1c 11029686 11029803 1
CDS:F58A3.1c 11037410 11037518 1
CDS:F58A3.1c 11037593 11037716 1
CDS:F58A3.1c 11037765 11038069 1
CDS:F58A3.1c 11038153 11038293 1
CDS:F58A3.1c 11038622 11038706 1
CDS:F58A3.1c 11038755 11038969 1
CDS:F58A3.1c 11039292 11039960 1

1 Sequence

Length
1890

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F58A3.1c.1 F58A3.1c.1 1890   X: 11028917-11039960