WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00071829 Genotype  integrated translational fusion transgene rme-2::GFP
Phenotype Remark  RNAi treatment resulted in WT distribution but reduced expression of RME-2-GFP. Remark  Secondary screen. Candidate endocytosis regulator based on RME-2-GFP localization (this experiment) and/or yolk uptake by oocytes (primary screen).

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011647 noca-1 T09E8.1 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09E8.1h T09E8.1h 2769   V: 13152920-13153087
CDS:T09E8.1c T09E8.1c 2769   V: 13155323-13155595
CDS:T09E8.1f T09E8.1f 2076   V: 13156784-13156841
CDS:T09E8.1a T09E8.1a 2244   V: 13161754-13161979
CDS:T09E8.1e T09E8.1e 1644   V: 13167416-13167570
CDS:T09E8.1b T09E8.1b 2070   V: 13159728-13159779
CDS:T09E8.1d T09E8.1d 1644   V: 13172799-13173041
CDS:T09E8.1g T09E8.1g 1788   V: 13164170-13164468

1 Laboratories

Primary Identifier
RT

1 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00030951

0 Strain