WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T09E8.1h Sequence Name  T09E8.1h
Length (nt)  2769   Chromosome Location  V: 13152920-13153087
Chromosome . Primary Identifier  V Chromosome Location . Start  13152920
Chromosome Location . End  13153087
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09E8.1h

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51088 NOCA-1, isoform h 103.2 922 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00085793
WBRNAi00086019
WBRNAi00049861
WBRNAi00052961
WBRNAi00052962
WBRNAi00000519
WBRNAi00016560
WBRNAi00018499
WBRNAi00071829
WBRNAi00069428
WBRNAi00062852
WBRNAi00035393
WBRNAi00071586
WBRNAi00065758
WBRNAi00086020

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T09E8.1h 13152920 13153087 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011647 noca-1 T09E8.1 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:T09E8.1h 13152920 13153087 1
CDS:T09E8.1h 13153132 13153270 1
CDS:T09E8.1h 13153313 13153488 1
CDS:T09E8.1h 13153620 13153700 1
CDS:T09E8.1h 13153749 13153846 1
CDS:T09E8.1h 13153892 13153980 1
CDS:T09E8.1h 13162315 13162460 1
CDS:T09E8.1h 13163498 13163708 1
CDS:T09E8.1h 13164297 13164468 1
CDS:T09E8.1h 13167637 13167724 1
CDS:T09E8.1h 13173130 13173283 1
CDS:T09E8.1h 13173706 13173825 1
CDS:T09E8.1h 13174046 13174689 1
CDS:T09E8.1h 13175054 13175404 1
CDS:T09E8.1h 13175452 13175583 1

1 Sequence

Length
2769

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T09E8.1h.1 T09E8.1h.1 3183   V: 13152919-13175996