WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00091439 Phenotype Remark  Proteins from the ESCRT-I (MVB-12) and ESCRT-III (VPS-32) complexes stably labeled multivesicular bodies as well as a small number of puncta on the plasma membrane of vps-4 (RNAi) embryos, as determined by GFP::MVB-12 fluorescence and VPS-32 antibody staining.
Remark  (Figure 5E, 5G) vps-4 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021334 vps-4 Y34D9A.10 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y34D9A.10 Y34D9A.10 1293   I: 1054362-1054469

1 Laboratories

Primary Identifier
FT

2 Phenotype

Identifier Name Description
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001403 antibody subcellular localization variant Any variation in the placement of a protein, as detected by antibody staining, within in a cell or cellular compartment compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040428

0 Strain