WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y34D9A.10 Sequence Name  Y34D9A.10
Length (nt)  1293   Chromosome Location  I: 1054362-1054469
Chromosome . Primary Identifier  I Chromosome Location . Start  1054362
Chromosome Location . End  1054469
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y34D9A.10

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39043 VPS-4 48.1 430 Caenorhabditis elegans
 

Other

27 RNAi

WormBase ID
WBRNAi00067112
WBRNAi00067269
WBRNAi00067691
WBRNAi00067855
WBRNAi00067944
WBRNAi00068120
WBRNAi00004578
WBRNAi00026641
WBRNAi00026642
WBRNAi00085612
WBRNAi00080722
WBRNAi00094151
WBRNAi00064972
WBRNAi00091439
WBRNAi00087683
WBRNAi00116754
WBRNAi00077253
WBRNAi00077255
WBRNAi00077254
WBRNAi00060721
WBRNAi00060722
WBRNAi00060723
WBRNAi00060724
WBRNAi00055827
WBRNAi00055828
WBRNAi00078469
WBRNAi00080694

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y34D9A.10 1054362 1054469 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021334 vps-4 Y34D9A.10 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y34D9A.10 1054362 1054469 -1
CDS:Y34D9A.10 1056061 1056205 -1
CDS:Y34D9A.10 1057694 1057912 -1
CDS:Y34D9A.10 1059380 1059543 -1
CDS:Y34D9A.10 1060450 1060670 -1
CDS:Y34D9A.10 1066193 1066325 -1
CDS:Y34D9A.10 1066392 1066561 -1
CDS:Y34D9A.10 1066657 1066768 -1
CDS:Y34D9A.10 1066849 1066869 -1

1 Sequence

Length
1293

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y34D9A.10.1 Y34D9A.10.1 1791   I: 1053894-1066899