WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00076394 Genotype  Punc-54::a-syn::gfp, Punc-54::tor-2
Remark  RNAi treatment caused no lethality or enhanced aggregation of a-syn.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

9 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002012 hsp-12.3 F38E11.1 Caenorhabditis elegans
WBGene00014293 C53B4.9 C53B4.9 Caenorhabditis elegans
WBGene00045116 C53D6.12 C53D6.12 Caenorhabditis elegans
WBGene00014366 F38E11.10 F38E11.10 Caenorhabditis elegans
WBGene00014367 F38E11.11 F38E11.11 Caenorhabditis elegans
WBGene00014631 ZK897.2 ZK897.2 Caenorhabditis elegans
WBGene00014632 ZK897.3 ZK897.3 Caenorhabditis elegans
WBGene00014633 ZK897.4 ZK897.4 Caenorhabditis elegans
WBGene00014306 F07C6.5 F07C6.5 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38E11.1 F38E11.1 330   IV: 9444898-9445152

1 Laboratories

Primary Identifier
UA

0 Phenotype

3 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000679 transgene subcellular localization variant Any variation in the subcellular localization of a gene product produced by DNA coded for by exogenous genetic material that has been introduced into the organism compared to its expression in control animals.
WBPhenotype:0001405 protein aggregation variant Variations that result in the accumulation of soluble/insoluble protein aggregates in a particular cell or tissue, compared to control. Protein aggregates are often formed by interactions between misfolded protein molecules and/or deficiencies in proper protein folding.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031384

0 Strain