WormMine: Gene WBGene00014367

• WormBase Gene ID: WBGene00014367
• Gene Name: F38E11.11
• Sequence Name: F38E11.11
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by sftb-1 and ogt-1 based on RNA-seq studies. Is affected by Ethanol based on RNA-seq studies.
• Biotype: SO:0001268
• Genetic Position: :±
• Length (nt): 122

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00014367

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:F38E11.11	F38E11.11	122	IV: 9464517-9464638

Other

0 CDSs

5 RNAi Result

• WBRNAi00106378
• WBRNAi00014567
• WBRNAi00076394
• WBRNAi00062703
• WBRNAi00092853

5 Allele

• gk964278
• gk964500
• gk962765
• gk572024
• gk528245

1 Chromosome

• WormBase ID: IV
• Organism: Caenorhabditis elegans
• Length (nt): 17493829

1 Chromosome Location

• Feature . Primary Identifier: WBGene00014367
• Start: 9464517
• End: 9464638
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

0 Downstream Intergenic Region

4 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_upregulated_neuron
	Transcripts that showed significantly increased expression in sftb-1(cer6) deletion homozygous comparing to to in N2 animals at L4 larva stage.	DESeq2, fold change > 2	WBPaper00058725:sftb-1(cer6)_upregulated
	Transcripts that showed significantly increased expression in strain CER276 sftb1(cer39[Q552P, R643C,K718E]) comparing to in N2 animals at L4 larva stage.	DESeq2, fold change > 2	WBPaper00058725:sftb-1(cer39)_upregulated
	Genes that are upregulated by 0.2M ethanol treatment.	Differences in gene expression levels between the two groups of worms were analyzed with Cufflinks 1.0.3, using a cutoff of twofold difference and FDR corrected p < 0.05.	WBPaper00041954:ethanol_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00014367
• Start: 9464517
• End: 9464638
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 122

1 Sequence Ontology Term