WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00078094 Genotype  rrf-3
Phenotype Remark  Loss of precise DTC guidance along the DV axis of the lateral epidermis during the phase 2 migration. Authors call this the class-s (class-short) defect as it is caused by disruption of the mig-6 short isoform. Migration is not slow as seen with the disruption of the long isoform. In wildtype, phase 1 migration comprises a longitudinal migration in opposite directions away from the mid-body using the ventral body muscle basement membrane as a substratum for migration. During phase 2, the DTCs turn and migrate across the lateral epidermal basement membrane towards the dorsal body wall muscles.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003242 mig-6 C37C3.6 Caenorhabditis elegans

0 Inhibits Predicted Gene

1 Laboratories

Primary Identifier
NW

1 Phenotype

Identifier Name Description
WBPhenotype:0000195 distal tip cell migration variant Variations in the migration pattern of distal tip cells compared to control animals. In C. elegans, DTCs located on the anterior and posterior ends of the gonad primordium typically migrate in a symmetrical U-shaped pattern.

2 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000749 embryonic development variant Variations in the progression of an embryo over time, from zygote formation to hatching compared to control.
WBPhenotype:0000750 larval development variant Variations in the progression of a larva over time, from its formation to the mature structure compared to control. The larva is the early, immature form of an animal between hatching and adulthood.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00033006

0 Strain