WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00102241 Phenotype Remark  RNAi of the autophagy transcriptional regulator PHA-4 (FoxA) decreases lifespan in an animal that is overexpressing LIPL-4 and therefore, contributes to the LIPL-4Ox extended life span phenotype. Overexpression of LIPL-4 promotes starvation survival. In this experiment the (ges-1 promoter is used to overexpress LIPL-4 (called LIPL-4Ox).
Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004013 pha-4 F38A6.1 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A6.1a F38A6.1a 1521   V: 20753052-20753093
CDS:F38A6.1b F38A6.1b 1329   V: 20755491-20755580
CDS:F38A6.1c F38A6.1c 1236   V: 20756913-20756975

1 Laboratories

Primary Identifier
GR

1 Phenotype

Identifier Name Description
WBPhenotype:0000736 autophagy variant Animals exhibit variations in the process by which their cells digest parts of their own cytoplasm, compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041973

0 Strain