WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00102039 Remark  (Figure 5B) hif-1 RNAi. Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001851 hif-1 F38A6.3 Caenorhabditis elegans

6 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A6.3a F38A6.3a 2160   V: 20780502-20780521
CDS:F38A6.3b F38A6.3b 2166   V: 20780502-20780521
CDS:F38A6.3e F38A6.3e 2136   V: 20781319-20781505
CDS:F38A6.3c F38A6.3c 1512   V: 20782536-20782568
CDS:F38A6.3d F38A6.3d 1998   V: 20780502-20780521
CDS:F38A6.3f F38A6.3f 2142   V: 20781319-20781505

0 Laboratories

0 Phenotype

1 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000727 enzyme activity variant Any variation in the function of naturally occurring macromolecular substances known as enzymes compared to control. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein (can include an RNA component).

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00040454

1 Strain

WormBase ID
WBStrain00000001