WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00110415 Genotype  hsp-4::gfp
Phenotype Remark  RNAi induced UPR, which is reflected in the induction of a transcriptional reporter hsp-4::gfp. Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001334 ero-1 Y105E8B.8 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8B.8a Y105E8B.8a 1437   I: 14664451-14664666
CDS:Y105E8B.8b Y105E8B.8b 1020   I: 14665479-14665572
CDS:Y105E8B.8c Y105E8B.8c 1542   I: 14664451-14664666
CDS:Y105E8B.8e Y105E8B.8e 753   I: 14671281-14671371

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0000717 gene expression variant Variations in the processes that convert a gene's sequence into a mature gene product or products (proteins or RNA), compared to control.
WBPhenotype:0001719 unfolded protein response variant Animals exhibit variations in any of the series of molecular signals generated as a consequence of the presence of unfolded proteins in the endoplasmic reticulum (ER) and or the mitochondria, compared to control. One such response is the increase in expression of chaperones.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00046403

0 Strain