WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00094588 Phenotype Remark  In wildtype there is a significant increase in mul-1 expression in response to irradiation with X rays, however there is no increase seen in elt-2 RNAi animals. In addition clec-67 and lys-1expression after irradiation with X rays also require elt-2. mul-1, clec-67 and lys-1 are all immune response genes.
Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001250 elt-2 C33D3.1 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33D3.1 C33D3.1 1302   X: 10481241-10481382

0 Laboratories

2 Phenotype

Identifier Name Description
WBPhenotype:0000717 gene expression variant Variations in the processes that convert a gene's sequence into a mature gene product or products (proteins or RNA), compared to control.
WBPhenotype:0000276 organism X ray response variant Animals exhibit variations in their response to X-ray radiation compared to that observed in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00041533

1 Strain

WormBase ID
WBStrain00000001