WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00103799 Genotype  sdc-3(Tra) unc-76/++
Phenotype Remark  This RNAi caused a dosage compensation "disruption". In sdc-3(Tra) unc-76/++ (heterozygous) untreated animals, heterozygous mothers develop as pseudomales. When RNAi for dpy-28 is introduced this transformed (Tra) phenotype is reversed. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. RNAi derived from yk32e9. sdc-3(Tra) unc-76 heterozygous mothers develop as pseudomales.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001087 dpy-28 Y39A1B.3 Caenorhabditis elegans

1 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39A1B.3 Y39A1B.3 4500   III: 10763147-10763274

1 Laboratories

Primary Identifier
TY

1 Phenotype

Identifier Name Description
WBPhenotype:0000718 dosage compensation variant Variations in the process of normalizing the expression level of X-linked genes between XX and XO animals compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031432

0 Strain