WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00063484 Phenotype Remark  defects in apical junction formation in the gut epithelium
Remark  the defect was determined using DLG-1 antibodies
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001333 erm-1 C01G8.5 Caenorhabditis elegans
WBGene00001978 hmp-1 R13H4.4 Caenorhabditis elegans

8 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13H4.4b R13H4.4b 2793   V: 11845878-11846261
CDS:R13H4.4e R13H4.4e 2652   V: 11845878-11846261
CDS:R13H4.4f R13H4.4f 2592   V: 11845878-11846261
CDS:R13H4.4c R13H4.4c 198   V: 11850823-11850881
CDS:C01G8.5a C01G8.5a 1692   I: 5284598-5284690
CDS:C01G8.5b C01G8.5b 1695   I: 5284598-5284690
CDS:R13H4.4a R13H4.4a 2784   V: 11845878-11846261
CDS:R13H4.4d R13H4.4d 2652   V: 11845878-11846261

1 Laboratories

Primary Identifier
OLB

1 Phenotype

Identifier Name Description
WBPhenotype:0000708 intestinal development variant Variations in the progression of the intestine over time from its initial formation to its mature structure compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00006400

1 Strain

WormBase ID
WBStrain00000001