WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R13H4.4f Sequence Name  R13H4.4f
Length (nt)  2592   Chromosome Location  V: 11845878-11846261
Chromosome . Primary Identifier  V Chromosome Location . Start  11845878
Chromosome Location . End  11846261
Paste the following link
Quick Links:
SummaryProteinsOther
 
Quick Links:
SummaryProteinsOther
 
Lists
This CDS isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13H4.4f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47738 HMP-1, isoform f 96.1 863 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00077351
WBRNAi00051940
WBRNAi00063482
WBRNAi00063483
WBRNAi00063484
WBRNAi00063488
WBRNAi00093057
WBRNAi00091281
WBRNAi00063487
WBRNAi00101428
WBRNAi00101412
WBRNAi00101410
WBRNAi00101430
WBRNAi00091282
WBRNAi00091283
WBRNAi00077347
WBRNAi00077349
WBRNAi00077352

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:R13H4.4f 11845878 11846261 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001978 hmp-1 R13H4.4 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier 		Start End Strand
CDS:R13H4.4f 11845878 11846261 1
CDS:R13H4.4f 11846306 11846761 1
CDS:R13H4.4f 11846808 11847011 1
CDS:R13H4.4f 11847407 11847937 1
CDS:R13H4.4f 11848040 11848867 1
CDS:R13H4.4f 11849351 11849539 1

1 Sequence

Length
2592

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R13H4.4f.1 R13H4.4f.1 4465   V: 11845877-11852161
Transcript:R13H4.4f.2 R13H4.4f.2 3564   V: 11845878-11852159