WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00087231 Phenotype Remark  mdt-1(RNAi) resulted in extra VPC divisions
Remark  Exact sequence used for RNAi not stated by authors, Ahringer laboratory clone used for curation. If Ahringer clone not available, Vidal laboratory clone used for curation.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004946 sop-3 Y71F9B.10 Caenorhabditis elegans

4 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y71F9B.10a Y71F9B.10a 4428   I: 2761318-2761513
CDS:Y71F9B.10b Y71F9B.10b 4134   I: 2761318-2761513
CDS:Y71F9B.10c Y71F9B.10c 4446   I: 2761318-2761513
CDS:Y71F9B.10g Y71F9B.10g 4152   I: 2761318-2761513

1 Laboratories

Primary Identifier
VW

4 Phenotype

Identifier Name Description
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000700 multivulva Multiple vulva-like protrusions are present along the ventral side of the animal. In C. elegans, this is usually a result of all six vulval precursor cells adopting primary or secondary vulval fates.
WBPhenotype:0000345 VPC cell division variant Any variation that alters the physical partitioning and separation of a vulval precursor cell into daughter cells compared to control.
WBPhenotype:0000358 extra cell division postembryonic Animals execute supernumerary cell divisions post-hatching.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00031331

0 Strain