WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00031986 Remark  bacterial-feeding RNAi began at the L1 larval stage
Secondary Identifier  MV_SV:mv_F39D8.2

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

2 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009560 psa-3 F39D8.2 Caenorhabditis elegans
WBGene00004123 pqn-36 F39D8.1 Caenorhabditis elegans

12 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39D8.2a F39D8.2a 828   X: 15407931-15408050
CDS:F39D8.2b F39D8.2b 726   X: 15408615-15408632
CDS:F39D8.1d F39D8.1d 2229   X: 15409342-15409397
CDS:F39D8.1e F39D8.1e 2238   X: 15409342-15409397
CDS:F39D8.1h F39D8.1h 2280   X: 15409342-15409397
CDS:F39D8.1c F39D8.1c 2775   X: 15409342-15409397
CDS:F39D8.1a F39D8.1a 2838   X: 15409342-15409397
CDS:F39D8.1b F39D8.1b 2760   X: 15409342-15409397
CDS:F39D8.1f F39D8.1f 2244   X: 15409342-15409397
CDS:F39D8.1g F39D8.1g 2253   X: 15409342-15409397
CDS:F39D8.2c F39D8.2c 630   X: 15409055-15409144
CDS:F39D8.2d F39D8.2d 474   X: 15417550-15417640

2 Laboratories

Primary Identifier
MV
SV

0 Phenotype

3 Phenotype _ Not _ Observed

Identifier Name Description
WBPhenotype:0000886 nematode phenotype Animals exhibit variations compared to a given control.
WBPhenotype:0000062 lethal Animals die prematurely at any stage of the life cycle.
WBPhenotype:0000049 postembryonic development variant Any variation in the progression of an animal over time, from hatching to adulthood, compared to control.

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00024497

0 Strain