WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F39D8.1c Sequence Name  F39D8.1c
Length (nt)  2775   Chromosome Location  X: 15409342-15409397
Chromosome . Primary Identifier  X Chromosome Location . Start  15409342
Chromosome Location . End  15409397
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39D8.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17812 PQN-36, isoform c 99.0 924 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00002393
WBRNAi00046768
WBRNAi00046769
WBRNAi00014597
WBRNAi00091333
WBRNAi00031986

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F39D8.1c 15409342 15409397 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004123 pqn-36 F39D8.1 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:F39D8.1c 15409342 15409397 -1
CDS:F39D8.1c 15409454 15409516 -1
CDS:F39D8.1c 15409568 15409634 -1
CDS:F39D8.1c 15410059 15410478 -1
CDS:F39D8.1c 15410565 15411700 -1
CDS:F39D8.1c 15411751 15412510 -1
CDS:F39D8.1c 15412565 15412626 -1
CDS:F39D8.1c 15412848 15412954 -1
CDS:F39D8.1c 15413194 15413252 -1
CDS:F39D8.1c 15413341 15413385 -1

1 Sequence

Length
2775

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F39D8.1c.1 F39D8.1c.1 2775   X: 15409342-15413385