WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00077787 Genotype  rpn-10 (tm1180)
Phenotype Remark  Synthetic effect with ufd-2 (RNAi) - characteristic expansion of oocytes and reduction of sperm in the gonads of young adult hermaphrodites. Remark  Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Authors amplified by PCR from a C. elegans mixed stage cDNA library. Primer sequences are available from the author on request.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006734 ufd-2 T05H10.5 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05H10.5a T05H10.5a 2943   II: 8062752-8062808
CDS:T05H10.5b T05H10.5b 2955   II: 8062752-8062808
CDS:T05H10.5c T05H10.5c 2940   II: 8062752-8062808

0 Laboratories

1 Phenotype

Identifier Name Description
WBPhenotype:0000822 sex determination variant Any variation in the processes that govern the sexually dimorphic development of germline or somatic tissue compared to control.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00028730

0 Strain