WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05H10.5c Sequence Name  T05H10.5c
Length (nt)  2940   Chromosome Location  II: 8062752-8062808
Chromosome . Primary Identifier  II Chromosome Location . Start  8062752
Chromosome Location . End  8062808
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05H10.5c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36948 UFD-2, isoform c 113.1 979 Caenorhabditis elegans
 

Other

28 RNAi

WormBase ID
WBRNAi00094726
WBRNAi00052577
WBRNAi00078675
WBRNAi00077786
WBRNAi00077790
WBRNAi00008026
WBRNAi00077767
WBRNAi00077769
WBRNAi00018255
WBRNAi00077784
WBRNAi00076654
WBRNAi00093476
WBRNAi00093484
WBRNAi00077775
WBRNAi00035234
WBRNAi00077787
WBRNAi00093500
WBRNAi00093492
WBRNAi00077793
WBRNAi00077785
WBRNAi00084273
WBRNAi00077773
WBRNAi00077772
WBRNAi00077777
WBRNAi00077780
WBRNAi00077781
WBRNAi00077791
WBRNAi00077792

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05H10.5c 8062752 8062808 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006734 ufd-2 T05H10.5 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05H10.5c 8062752 8062808 1
CDS:T05H10.5c 8062863 8063177 1
CDS:T05H10.5c 8063223 8064144 1
CDS:T05H10.5c 8064198 8065104 1
CDS:T05H10.5c 8065153 8065507 1
CDS:T05H10.5c 8065560 8065943 1

1 Sequence

Length
2940

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05H10.5c.1 T05H10.5c.1 3201   II: 8062741-8066193