WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00083594 Genotype  rrf-1(pk1417); glp-1(oz264)
Phenotype Remark  Abnormal oocytes.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006888 vbh-1 Y54E10A.9 Caenorhabditis elegans

3 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54E10A.9b Y54E10A.9b 1935   I: 3159764-3159867
CDS:Y54E10A.9a Y54E10A.9a 1926   I: 3159764-3159867
CDS:Y54E10A.9c Y54E10A.9c 1983   I: 3159764-3159867

1 Laboratories

Primary Identifier
BS

4 Phenotype

Identifier Name Description
WBPhenotype:0001260 oocyte morphology variant Haploid female germ cells (oocytes) exhibit variations in their overall structure, appearance or contents compared to control.
WBPhenotype:0000050 embryonic lethal Animals die during embryonic development. In C. elegans, often assayed as refractile eggs that fail to hatch; when applied to large-scale RNAi screens in C. elegans, more than 10% of embryos die.
WBPhenotype:0000812 germ cell development variant Variations in the progression of the immature germ cell over time, from its formation from precursors to the mature structure (gamete) compared to control.
WBPhenotype:0001925 oocytes disorganized Oocytes are no longer arranged in the gonad in the same manner as control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036244

0 Strain