WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

RNAi :

WormBase ID  WBRNAi00101290 Genotype  rrf-3(pk1426); him-8(e1489); maIs229 [Pmir-85::GFP]
Phenotype Remark  RNAi resulted in abnormal expression of the Pmir-85::GFP transgene in male animals Remark  (Table 1) hcp-6 RNAi. Exact sequence used for RNAi not stated by authors, Vidal laboratory clone used for curation.
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Data Sets

Name URL
WormBaseAcedbConverter  

1 Inhibits Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001833 hcp-6 Y110A7A.1 Caenorhabditis elegans

2 Inhibits Predicted Gene

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y110A7A.1a Y110A7A.1a 5175   I: 5165157-5165340
CDS:Y110A7A.1b Y110A7A.1b 5277   I: 5165157-5165340

1 Laboratories

Primary Identifier
DZ

1 Phenotype

Identifier Name Description
WBPhenotype:0000961 pattern of transgene expression variant Any variation in the cellular or subcellular pattern of expression of a gene product produced by exogenous DNA that has been introduced into the organism compared to its expression in control animals.

0 Phenotype _ Not _ Observed

1 Reference

First Author Title Year Journal Volume Pages PubMed ID
            WBPaper00036019

0 Strain